Gluten Free Apple Crisp {BEST Healty, Easy Recipe} –

This Gluten Free Apple Crisp is the latest delectable pit stop on our fruity dessert road trip. A haven for anyone who loves quintessential fall flavors, it features a deep, nutty pecan crunch, a warm spike of cinnamon, and a cozy, tender apple filling, all wrapped in a big, buttery crumb topping.

This recipe is sponsored by Bob’s Red Mill.

Destined to be topped with ice cream, I have no doubt EVERYONE (no matter their diet) will fancy this gluten free apple dessert!

With so many past stops along the fruit crisp, cobbler, and crumble highway, I like to think of myself as a well-traveled connoisseur.

You might be thinking that after creating a scrumptious Vegan Apple Crisp (which is dairy-free and features the addictive addition of coconut) and the spectacular Everyone’s Invited Apple Crisp from my Well Plated Cookbook (which has a surprise ingredient addition that you’ll need a copy to discover!), that I’ve been-there-done-that with apple desserts.

But that’s the joy of fruity crisp and crumble delights: there’s so much room to dream up variations and play around. Each one offers its own scrumptious nuances.

Go wild with an indulgent amount of crisp topping (like in this Peach Crisp), or focus on a healthier alternative by trading out some butter for Greek yogurt (like in this Strawberry Crisp). Do a fruit combo (Cherry Blackberry Crisp) or use an unexpected filling (Pumpkin Pecan Cobbler).

Thus, all the more reason to cherish the adventure… and the results. Whether you follow a gluten-free diet or not, this recipe is wonderful. It’s one of my absolute favorite crisp recipes to date!

This gluten free apple crisp uses no flour, instead opting for Bob’s Red Mill Gluten Free Rolled Oats and ground almond flour to create a perfect, rich streusel topping.

The oats add a pleasing, hearty crunch that strikes an ideal balance with the pie filling-like apples underneath.

Gluten free apple crisp in a baking dish

Should You Peel Apples for Crisp?

When possible, I usually leave the peel on the apples in apple desserts, as these Baked Apple Slices and Crockpot Applesauce can attest. The texture of the peel adds a slight crunch, and much of an apple’s nutritional value is found in the peel.

But in the case of this gluten free apple crisp, I prefer to peel the apples. Since the crisp’s topping of oats and nuts brings the A+ crunch game, I find the apples’ peels detract from the crisp’s balance of texture.

I do not recommend making gluten free apple crisp with canned apples. The texture of canned apples will completely break down once the crisp bakes (we want the apples tender, but not mushy). Apples are easy to slice, so canned apples don’t save much time. Further, canning typically reduces the level of vitamins compared to fresh fruit.

Gluten free apple crisp in a bowl

The Difference Between Crisps and Crumbles

I look this one up every fall when I’m ready to bake my first apple dessert!

  • Crisps. The topping layer of a crisp, like this recipe and most of my other crisp recipes, usually has a combination of oats, nuts, sugar, butter, flour, and warm spices like cinnamon. The topping is fairly evenly distributed and granola-like.
  • Crumbles. The topping layer of a crumble usually omits the oats and nuts, using only butter, flour, sugar, and spices. The topping is clumpier and more streusel like.

Thus, if this were a gluten free apple crumble (i.e. without the oats and nuts) it would tend to have a subtly different texture.

Personally, I adore the dimension of the oats and nuts in the topping, which is why I usually bake what is technically a crisp.

BIG PICTURE: Crisps and crumbles are both a baked fruit dessert with a golden, crunchy topping layer. Half the time, people use the terms interchangeably anyway.

Plus, I think we can all agree…whether you call it a crisp or a crumble, it will taste pretty darn delicious!

Gluten free apple crisp in a baking dish

How To Make Gluten Free Apple Crisp

Oats are key to delivering that complementing crunch atop the tender, baked apples. I don’t recommend making this gluten free apple crisp without the oats, as the topping will lose its rich texture.

The Ingredients

  • Bob’s Red Mill Gluten Free Rolled Oats. A star in texture, nutrition, AND the key to keeping this crisp truly GF.

There is a misnomer that oats are not gluten free. Even though oats do not inherently contain gluten, most producers process oats in a plant that also processes flour. In that instance, yes, those oats would not be gluten free, as the cross-contamination risk is high.

Since Bob’s Red Mill uses a separate facility and adheres to strict protocols for gluten-free processing, its products are safe even for those who have celiac.

A bag of rolled oats

  • Almond Flour. I ADORE this ingredient! It’s made of finely ground almonds only and gives the crisp (and really anything you make with it) an unbelievably rich flavor. This Gluten Free Carrot Cake is another one of my favorite desserts that takes advantage of its subtle warmth. You can also use it for any of these almond flour recipes.
  • Pecans. In addition to the oats, pecans add scrumptious crunch and nuttiness to the topping.
  • Apples. Sweet, juicy, healthy, and 100% delicious in a crisp recipe. I recommend using Granny Smith, Macintosh, Honeycrisp, Pink Lady, or a combination of these varieties.
  • Maple Syrup. Not only does maple syrup allow us to naturally sweeten the filling, but it also adds a scrumptious cozy flavor. Honey would also work fabulously here.
  • Bourbon. Because I couldn’t resist, and because the subtle warm vanilla notes in bourbon make it an excellent addition.  You could use rum instead. If you prefer to make your apple crisp without alcohol, you can swap in water.
  • Lemon Juice. For a touch of brightness.
  • Cinnamon. It complements all the other flavors perfectly and turns the crisp into one big bowl of comfort.
  • Toppings. Ice cream, frozen yogurt, or Greek yogurt. You can’t go wrong!

The Directions

  1. Melt the butter.A mixing bowl with oats, pecans, flour, and a bowl of butter
  2. In a big bowl, stir together the oats, flour, sugar, pecans, and salt.
    A mixing bowl with crisp topping
  3. Pour the butter over the oat mixture. Stir to combine.
    Sliced apples in a bowl
  4. In a separate bowl, stir together the apple slices with the other filling ingredients.
    A baking dish with apple crisp on a baking sheet
  5. Transfer the apple filling mixture to a baking dish. Scatter the oat mixture over the top.
  6. Bake the apple crisp at 350 degrees F for 45 to 55 minutes. DIG IN!

Tips for Freezing Apple Crisp

  • Thankfully, gluten free apple crisp CAN be frozen, so you can always have some on hand for future cravings.
  • To Freeze. Let the crisp cool completely. Tightly cover it or place it in an airtight freezer-safe storage container. Freeze the crisp for up to 3 months. Let thaw overnight in the refrigerator before reheating.
  • To Freeze Unbaked. Assemble right up until the point of baking. Tightly cover your apple crisp, and lay it flat in the freezer for up to 3 months. Let thaw overnight in the refrigerator, then bake as directed.

Scaling This Recipe Up or Down

  • Gluten Free Apple Crisp for a Crowd. To scale up this recipe for 8 or more people, I recommend following the same recipe by using 1.5 times the ingredients and baking it in a 9”x13” pan.
  • Gluten Free Apple Crisp for Two or for One. If you desire to make this recipe in a smaller quantity, I recommend cutting down the ingredients to one-third or even one-fourth of those listed in the recipe. Then, portion it into individual ramekins for baking (make sure your ramekin is oven safe).

A spoon in gluten free apple crisp

More Favorite Apple Recipes

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Gluten Free Apple Crisp

Gluten Free Apple Crisp featuring a buttery oat topping over a warm apple cinnamon filling. Easy and scrumptious. The perfect apple dessert!

Servings: 6 servings (1 9×9-inch pan)


  • 2 1/2 pounds mixed applessuch as Granny Smith, Macintosh, Honeycrisp, and Pink Lady, peeled, cored, and cut into 1/2-inch-thick wedges (about 6 medium apples)
  • 1/4 cup pure maple syrup or honey
  • 2 tablespoons bourbonor rum or water
  • 1 ½ teaspoons ground cinnamon
  • 1 tablespoon freshly squeezed lemon juice
  • 1/2 tablespoon cornstarch
  • Vanilla ice creamfrozen yogurt, or Greek yogurt, for serving
  • Place a rack in the center of the oven and preheat the oven to 350 degrees F. Lightly coat a 9×9-inch or similarly sized baking dish with non-stick spray.

  • In a medium bowl, stir together the oats, almond flour, brown sugar, pecans, and salt.

  • In a microwave-safe bowl in the microwave (or a saucepan on the stove), melt the butter. Pour over the top of the oat mixture. With a fork or rubber spatula, stir until the crumbs are evenly moistened.

  • To a large mixing bowl, add the apples, maple syrup, bourbon, cinnamon, lemon juice, and cornstarch. With a big spoon, stir to combine.

  • Scoop the apples and any liquid that has collected at the bottom of the bowl into the prepared baking dish into an even layer. It will be very full. Nudge the apple slices around a bit so that they lay fairly flat.

  • With your hands, squeeze chunks of the crumb mixture together to create clumps of assorted sizes, and place them on top of the apples. Scatter any remaining crumb mixture over the top.

  • Bake the crisp until the apples are tender (you may need to use a fork to peek down underneath that generous topping and check on the apples) and the crumb topping is crisp and deep golden brown, about 45 to 55 minutes. Check the crisp halfway through, then periodically during baking; if at any point, the topping browns more quickly than you would like, tent the pan with foil to protect the crust, then continue baking as directed. Serve warm with a big scoop of ice cream.

  • TO STORE: Refrigerate crisp in an airtight storage container for up to 4 days. 
  • TO REHEAT: Rewarm leftovers in a baking dish in the oven at 350 degrees F. 
  • TO FREEZE: Let the crisp cool completely. Tightly cover it or place it in an airtight freezer-safe storage container. Freeze the crisp for up to 3 months. Let thaw overnight in the refrigerator before reheating.
  • TO FREEZE UNBAKED: Tightly cover your apple crisp, and lay it flat in the freezer for up to 3 months. Let thaw overnight in the refrigerator, then bake as directed.

I am sharing this post in partnership with Bob’s Red Mill. As always, all opinions are my own. Thanks for supporting the brands and companies that make it possible for me to continue to create quality content for you! For more healthy recipe inspiration, coupons, or to find a store that carries Bob’s Red Mill products near you, visit

This post contains some affiliate links, which means that I make a small commission off items you purchase at no additional cost to you.

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